Add GEDCOM import/export
A pragmatic GEDCOM parser + mapper: import reads INDI/FAM/SOUR and creates people, names, life events, partnership + qualified parent-child relationships, marriage events, places (deduped), sources, and citations from SOUR refs — returning a mapping report (counts + unmapped tags). Export serializes the tree back to GEDCOM (families derived from the edge model). Import is additive (no merge) and runs inline for now. Round-trip test passes; 29 tests total. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> Signed-off-by: Justin Paul <justin@jpaul.me>
This commit is contained in:
@@ -6,6 +6,7 @@ from app.api.v1 import (
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auth,
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auth,
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citations,
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citations,
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events,
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events,
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gedcom,
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media,
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media,
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persons,
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persons,
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relationships,
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relationships,
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@@ -24,3 +25,4 @@ api_router.include_router(relationships.router)
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api_router.include_router(sources.router)
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api_router.include_router(sources.router)
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api_router.include_router(citations.router)
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api_router.include_router(citations.router)
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api_router.include_router(media.router)
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api_router.include_router(media.router)
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api_router.include_router(gedcom.router)
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@@ -0,0 +1,37 @@
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import uuid
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from fastapi import APIRouter, File, Response, UploadFile
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from app.api.deps import CurrentUser, SessionDep
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from app.schemas.gedcom import ImportReport
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from app.services import gedcom, tree_service
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router = APIRouter(prefix="/trees", tags=["gedcom"])
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@router.post("/{tree_id}/gedcom/import", response_model=ImportReport)
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async def import_gedcom(
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tree_id: uuid.UUID,
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session: SessionDep,
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current: CurrentUser,
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file: UploadFile = File(...),
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) -> ImportReport:
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# NOTE: additive — records are created as new; existing people are not merged.
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tree = await tree_service.get_tree(session, viewer_id=current.id, tree_id=tree_id)
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text = (await file.read()).decode("utf-8", errors="replace")
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report = await gedcom.import_gedcom(session, actor=current, tree=tree, text=text)
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return ImportReport(**report)
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@router.get("/{tree_id}/gedcom/export")
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async def export_gedcom(
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tree_id: uuid.UUID, session: SessionDep, current: CurrentUser
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) -> Response:
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tree = await tree_service.get_tree(session, viewer_id=current.id, tree_id=tree_id)
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text = await gedcom.export_gedcom(session, viewer_id=current.id, tree=tree)
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safe = "".join(c for c in tree.name if c.isalnum() or c in " -_").strip() or "tree"
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return Response(
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content=text,
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media_type="text/plain",
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headers={"Content-Disposition": f'attachment; filename="{safe}.ged"'},
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)
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@@ -0,0 +1,6 @@
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from pydantic import BaseModel
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class ImportReport(BaseModel):
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counts: dict[str, int]
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unmapped_tags: list[str]
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@@ -0,0 +1,451 @@
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"""GEDCOM import/export.
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A pragmatic parser + mapper for the common subset of GEDCOM (5.5.1 / 7 share
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the line grammar): INDI, FAM, SOUR. Import maps records into a tree and returns
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a mapping report (counts + unmapped tags); export serializes the tree back to
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GEDCOM. Runs inline for now — large files should move to the worker later.
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"""
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import re
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import uuid
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from collections import defaultdict
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from datetime import date
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from sqlalchemy import select
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from sqlalchemy.ext.asyncio import AsyncSession
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from app.models.enums import ParentChildQualifier, RelationshipType
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from app.models.event import Event
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from app.models.person import Name, Person
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from app.models.place import Place
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from app.models.relationship import Relationship
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from app.models.source import Citation, Source
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from app.models.tree import Tree
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from app.models.user import User
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from app.services import privacy
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from app.services.audit import record_audit
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from app.services.exceptions import Forbidden
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# GEDCOM event tag -> our event_type (INDI-level).
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INDI_EVENTS = {
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"BIRT": "birth", "DEAT": "death", "BAPM": "baptism", "CHR": "christening",
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"BURI": "burial", "CREM": "cremation", "RESI": "residence", "CENS": "census",
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"IMMI": "immigration", "EMIG": "emigration", "OCCU": "occupation",
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"EDUC": "education", "GRAD": "graduation", "RETI": "retirement",
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"NATU": "naturalization", "BAPL": "baptism",
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}
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# FAM-level events.
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FAM_EVENTS = {"MARR": "marriage", "DIV": "divorce", "ENGA": "engagement"}
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EVENT_TO_GED = {v: k for k, v in {**INDI_EVENTS, **FAM_EVENTS}.items()}
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class GedcomNode:
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__slots__ = ("level", "tag", "value", "xref", "children")
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def __init__(self, level: int, tag: str, value: str = "", xref: str | None = None):
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self.level = level
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self.tag = tag
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self.value = value
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self.xref = xref
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self.children: list[GedcomNode] = []
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def first(self, tag: str) -> "GedcomNode | None":
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return next((c for c in self.children if c.tag == tag), None)
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def all(self, tag: str) -> list["GedcomNode"]:
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return [c for c in self.children if c.tag == tag]
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def text(self, tag: str, default: str | None = None) -> str | None:
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n = self.first(tag)
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return n.value if n is not None else default
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def parse_records(text: str) -> list[GedcomNode]:
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roots: list[GedcomNode] = []
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stack: list[GedcomNode] = []
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for raw in text.replace("\r\n", "\n").replace("\r", "\n").split("\n"):
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line = raw.lstrip("").rstrip()
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if not line.strip():
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continue
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parts = line.split(" ", 1)
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try:
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level = int(parts[0])
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except ValueError:
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continue
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rest = parts[1] if len(parts) > 1 else ""
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xref: str | None = None
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if rest.startswith("@"):
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end = rest.find("@", 1)
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if end != -1:
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xref = rest[: end + 1]
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rest = rest[end + 1:].strip()
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tparts = rest.split(" ", 1)
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tag = tparts[0]
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value = tparts[1] if len(tparts) > 1 else ""
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while stack and stack[-1].level >= level:
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stack.pop()
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parent = stack[-1] if stack else None
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if tag in ("CONC", "CONT") and parent is not None:
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parent.value += ("" if tag == "CONC" else "\n") + value
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continue
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node = GedcomNode(level, tag, value, xref)
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if parent is None:
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roots.append(node)
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else:
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parent.children.append(node)
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stack.append(node)
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return roots
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def _parse_name(value: str) -> tuple[str | None, str | None]:
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if "/" in value:
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given, _, rest = value.partition("/")
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surname = rest.split("/", 1)[0]
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return given.strip() or None, surname.strip() or None
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return value.strip() or None, None
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def _year(date_value: str | None) -> str | None:
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if not date_value:
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return None
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m = re.search(r"\b(\d{3,4})\b", date_value)
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return m.group(1) if m else None
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def _date_start(date_value: str | None) -> date | None:
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y = _year(date_value)
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if not y:
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return None
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try:
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return date(int(y), 1, 1)
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except ValueError:
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return None
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def _sex(value: str | None) -> str | None:
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if not value:
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return None
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v = value.strip().upper()
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return {"M": "male", "F": "female"}.get(v, value.strip().lower() or None)
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async def import_gedcom(
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session: AsyncSession, *, actor: User, tree: Tree, text: str
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) -> dict:
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if not await privacy.can_edit_tree(session, user_id=actor.id, tree=tree):
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raise Forbidden("not an editor of this tree")
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roots = parse_records(text)
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counts = defaultdict(int)
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unmapped: set[str] = set()
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place_cache: dict[str, uuid.UUID] = {}
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source_map: dict[str, uuid.UUID] = {}
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person_map: dict[str, uuid.UUID] = {}
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async def place_id(name: str | None) -> uuid.UUID | None:
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if not name:
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return None
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if name in place_cache:
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return place_cache[name]
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p = Place(tree_id=tree.id, name=name)
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session.add(p)
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await session.flush()
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place_cache[name] = p.id
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counts["places"] += 1
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return p.id
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# Sources first (so citations can reference them).
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for rec in roots:
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if rec.tag == "SOUR" and rec.xref:
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src = Source(
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tree_id=tree.id,
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title=rec.text("TITL") or rec.text("ABBR") or "Untitled source",
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author=rec.text("AUTH"),
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publication_info=rec.text("PUBL"),
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citation_text=rec.text("TEXT"),
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)
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session.add(src)
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await session.flush()
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source_map[rec.xref] = src.id
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counts["sources"] += 1
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async def add_citations(holder: GedcomNode, **target) -> None:
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for s in holder.all("SOUR"):
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sid = source_map.get(s.value.strip())
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if sid is None:
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continue
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session.add(
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Citation(tree_id=tree.id, source_id=sid, page=s.text("PAGE"), **target)
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)
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counts["citations"] += 1
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# Individuals.
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for rec in roots:
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if rec.tag != "INDI" or not rec.xref:
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continue
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person = Person(tree_id=tree.id, gender=_sex(rec.text("SEX")))
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session.add(person)
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await session.flush()
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person_map[rec.xref] = person.id
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counts["persons"] += 1
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for i, nm in enumerate(rec.all("NAME")):
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given, surname = _parse_name(nm.value)
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session.add(
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Name(
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tree_id=tree.id,
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person_id=person.id,
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name_type="birth",
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given=given,
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surname=surname,
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display_name=nm.value or None,
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is_primary=(i == 0),
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sort_order=i,
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)
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)
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counts["names"] += 1
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await add_citations(rec, person_id=person.id)
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for child in rec.children:
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if child.tag in INDI_EVENTS:
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dv = child.text("DATE")
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ev = Event(
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tree_id=tree.id,
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person_id=person.id,
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event_type=INDI_EVENTS[child.tag],
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date_value=dv,
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date_start=_date_start(dv),
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place_id=await place_id(child.text("PLAC")),
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)
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session.add(ev)
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await session.flush()
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counts["events"] += 1
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await add_citations(child, event_id=ev.id)
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elif child.tag in ("NAME", "SEX", "SOUR", "FAMC", "FAMS", "CHAN", "OBJE", "_UID"):
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continue
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else:
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unmapped.add(child.tag)
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# Families -> partnerships, parent-child edges, marriage events.
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for rec in roots:
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if rec.tag != "FAM":
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continue
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counts["families"] += 1
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husb = person_map.get((rec.text("HUSB") or "").strip())
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wife = person_map.get((rec.text("WIFE") or "").strip())
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partnership_id: uuid.UUID | None = None
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if husb and wife:
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rel = Relationship(
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tree_id=tree.id,
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type=RelationshipType.partnership,
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person_from_id=husb,
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person_to_id=wife,
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)
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session.add(rel)
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await session.flush()
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partnership_id = rel.id
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counts["relationships"] += 1
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for fe in rec.children:
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if fe.tag in FAM_EVENTS and partnership_id is not None:
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dv = fe.text("DATE")
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ev = Event(
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tree_id=tree.id,
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relationship_id=partnership_id,
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event_type=FAM_EVENTS[fe.tag],
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date_value=dv,
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date_start=_date_start(dv),
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place_id=await place_id(fe.text("PLAC")),
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)
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session.add(ev)
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await session.flush()
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counts["events"] += 1
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for chil in rec.all("CHIL"):
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cp = person_map.get(chil.value.strip())
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if cp is None:
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continue
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for parent in (husb, wife):
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if parent and parent != cp:
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session.add(
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Relationship(
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tree_id=tree.id,
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type=RelationshipType.parent_child,
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person_from_id=parent,
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person_to_id=cp,
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qualifier=ParentChildQualifier.biological,
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)
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)
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counts["relationships"] += 1
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record_audit(
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session,
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action="import",
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entity_type="Gedcom",
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tree_id=tree.id,
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actor_user_id=actor.id,
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after=dict(counts),
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)
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await session.commit()
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return {"counts": dict(counts), "unmapped_tags": sorted(unmapped)}
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def _ged_date(value: str | None) -> str | None:
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return value.strip() if value else None
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async def export_gedcom(session: AsyncSession, *, viewer_id: uuid.UUID, tree: Tree) -> str:
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if not await privacy.can_view_tree(session, user_id=viewer_id, tree=tree):
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raise Forbidden("not permitted to view this tree")
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persons = list(
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(
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await session.execute(
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select(Person).where(Person.tree_id == tree.id, Person.deleted_at.is_(None))
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)
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).scalars().all()
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)
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names = list(
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(
|
||||||
|
await session.execute(
|
||||||
|
select(Name).where(Name.tree_id == tree.id, Name.deleted_at.is_(None))
|
||||||
|
)
|
||||||
|
).scalars().all()
|
||||||
|
)
|
||||||
|
events = list(
|
||||||
|
(
|
||||||
|
await session.execute(
|
||||||
|
select(Event).where(Event.tree_id == tree.id, Event.deleted_at.is_(None))
|
||||||
|
)
|
||||||
|
).scalars().all()
|
||||||
|
)
|
||||||
|
rels = list(
|
||||||
|
(
|
||||||
|
await session.execute(
|
||||||
|
select(Relationship).where(
|
||||||
|
Relationship.tree_id == tree.id, Relationship.deleted_at.is_(None)
|
||||||
|
)
|
||||||
|
)
|
||||||
|
).scalars().all()
|
||||||
|
)
|
||||||
|
sources = list(
|
||||||
|
(
|
||||||
|
await session.execute(
|
||||||
|
select(Source).where(Source.tree_id == tree.id, Source.deleted_at.is_(None))
|
||||||
|
)
|
||||||
|
).scalars().all()
|
||||||
|
)
|
||||||
|
places = {
|
||||||
|
p.id: p
|
||||||
|
for p in (
|
||||||
|
await session.execute(select(Place).where(Place.tree_id == tree.id))
|
||||||
|
).scalars().all()
|
||||||
|
}
|
||||||
|
|
||||||
|
pxref = {p.id: f"@I{i + 1}@" for i, p in enumerate(persons)}
|
||||||
|
gender_by_id = {p.id: p.gender for p in persons}
|
||||||
|
sxref = {s.id: f"@S{i + 1}@" for i, s in enumerate(sources)}
|
||||||
|
names_by_person: dict[uuid.UUID, list[Name]] = defaultdict(list)
|
||||||
|
for n in sorted(names, key=lambda n: (n.sort_order, not n.is_primary)):
|
||||||
|
names_by_person[n.person_id].append(n)
|
||||||
|
events_by_person: dict[uuid.UUID, list[Event]] = defaultdict(list)
|
||||||
|
events_by_rel: dict[uuid.UUID, list[Event]] = defaultdict(list)
|
||||||
|
for e in events:
|
||||||
|
if e.person_id:
|
||||||
|
events_by_person[e.person_id].append(e)
|
||||||
|
elif e.relationship_id:
|
||||||
|
events_by_rel[e.relationship_id].append(e)
|
||||||
|
|
||||||
|
# Build families from parent-child + partnership edges (group by parent set).
|
||||||
|
parents_of: dict[uuid.UUID, set[uuid.UUID]] = defaultdict(set)
|
||||||
|
for r in rels:
|
||||||
|
if r.type == RelationshipType.parent_child:
|
||||||
|
parents_of[r.person_to_id].add(r.person_from_id)
|
||||||
|
fams: dict[frozenset, dict] = {}
|
||||||
|
for child, ps in parents_of.items():
|
||||||
|
key = frozenset(ps)
|
||||||
|
fams.setdefault(key, {"parents": set(ps), "children": [], "rel_id": None})
|
||||||
|
fams[key]["children"].append(child)
|
||||||
|
for r in rels:
|
||||||
|
if r.type == RelationshipType.partnership:
|
||||||
|
key = frozenset({r.person_from_id, r.person_to_id})
|
||||||
|
fam = fams.setdefault(
|
||||||
|
key,
|
||||||
|
{"parents": {r.person_from_id, r.person_to_id}, "children": [], "rel_id": None},
|
||||||
|
)
|
||||||
|
fam["rel_id"] = r.id
|
||||||
|
fam_list = list(fams.values())
|
||||||
|
fxref = {id(f): f"@F{i + 1}@" for i, f in enumerate(fam_list)}
|
||||||
|
# person -> the families they are a spouse in / a child in
|
||||||
|
spouse_fams: dict[uuid.UUID, list[str]] = defaultdict(list)
|
||||||
|
child_fams: dict[uuid.UUID, str] = {}
|
||||||
|
for f in fam_list:
|
||||||
|
x = fxref[id(f)]
|
||||||
|
for pid in f["parents"]:
|
||||||
|
spouse_fams[pid].append(x)
|
||||||
|
for cid in f["children"]:
|
||||||
|
child_fams[cid] = x
|
||||||
|
|
||||||
|
out: list[str] = ["0 HEAD", "1 SOUR Provenance", "1 GEDC", "2 VERS 5.5.1", "1 CHAR UTF-8"]
|
||||||
|
|
||||||
|
for p in persons:
|
||||||
|
out.append(f"0 {pxref[p.id]} INDI")
|
||||||
|
for n in names_by_person.get(p.id, []):
|
||||||
|
display = n.display_name or f"{n.given or ''} /{n.surname or ''}/".strip()
|
||||||
|
out.append(f"1 NAME {display}")
|
||||||
|
sex = {"male": "M", "female": "F"}.get(p.gender or "")
|
||||||
|
if sex:
|
||||||
|
out.append(f"1 SEX {sex}")
|
||||||
|
for e in events_by_person.get(p.id, []):
|
||||||
|
tag = EVENT_TO_GED.get(e.event_type)
|
||||||
|
if not tag:
|
||||||
|
continue
|
||||||
|
out.append(f"1 {tag}")
|
||||||
|
if _ged_date(e.date_value):
|
||||||
|
out.append(f"2 DATE {e.date_value}")
|
||||||
|
if e.place_id and e.place_id in places:
|
||||||
|
out.append(f"2 PLAC {places[e.place_id].name}")
|
||||||
|
if p.id in child_fams:
|
||||||
|
out.append(f"1 FAMC {child_fams[p.id]}")
|
||||||
|
for x in spouse_fams.get(p.id, []):
|
||||||
|
out.append(f"1 FAMS {x}")
|
||||||
|
|
||||||
|
for f in fam_list:
|
||||||
|
x = fxref[id(f)]
|
||||||
|
out.append(f"0 {x} FAM")
|
||||||
|
ps = list(f["parents"])
|
||||||
|
# HUSB/WIFE by recorded gender where possible.
|
||||||
|
males = [pid for pid in ps if gender_by_id.get(pid) == "male"]
|
||||||
|
females = [pid for pid in ps if gender_by_id.get(pid) == "female"]
|
||||||
|
husb = males[0] if males else (ps[0] if ps else None)
|
||||||
|
wife = females[0] if females else next((pid for pid in ps if pid != husb), None)
|
||||||
|
if husb:
|
||||||
|
out.append(f"1 HUSB {pxref[husb]}")
|
||||||
|
if wife:
|
||||||
|
out.append(f"1 WIFE {pxref[wife]}")
|
||||||
|
for cid in f["children"]:
|
||||||
|
out.append(f"1 CHIL {pxref[cid]}")
|
||||||
|
if f["rel_id"]:
|
||||||
|
for e in events_by_rel.get(f["rel_id"], []):
|
||||||
|
tag = EVENT_TO_GED.get(e.event_type)
|
||||||
|
if not tag:
|
||||||
|
continue
|
||||||
|
out.append(f"1 {tag}")
|
||||||
|
if _ged_date(e.date_value):
|
||||||
|
out.append(f"2 DATE {e.date_value}")
|
||||||
|
|
||||||
|
for s in sources:
|
||||||
|
out.append(f"0 {sxref[s.id]} SOUR")
|
||||||
|
if s.title:
|
||||||
|
out.append(f"1 TITL {s.title}")
|
||||||
|
if s.author:
|
||||||
|
out.append(f"1 AUTH {s.author}")
|
||||||
|
if s.publication_info:
|
||||||
|
out.append(f"1 PUBL {s.publication_info}")
|
||||||
|
|
||||||
|
out.append("0 TRLR")
|
||||||
|
return "\n".join(out) + "\n"
|
||||||
@@ -0,0 +1,77 @@
|
|||||||
|
"""GEDCOM import + export round-trip."""
|
||||||
|
|
||||||
|
from tests.conftest import auth, register
|
||||||
|
|
||||||
|
SAMPLE = b"""0 HEAD
|
||||||
|
1 CHAR UTF-8
|
||||||
|
0 @I1@ INDI
|
||||||
|
1 NAME John /Smith/
|
||||||
|
1 SEX M
|
||||||
|
1 BIRT
|
||||||
|
2 DATE 1850
|
||||||
|
2 PLAC Boston, Massachusetts
|
||||||
|
0 @I2@ INDI
|
||||||
|
1 NAME Mary /Jones/
|
||||||
|
1 SEX F
|
||||||
|
0 @I3@ INDI
|
||||||
|
1 NAME Junior /Smith/
|
||||||
|
1 BIRT
|
||||||
|
2 DATE 1872
|
||||||
|
0 @F1@ FAM
|
||||||
|
1 HUSB @I1@
|
||||||
|
1 WIFE @I2@
|
||||||
|
1 CHIL @I3@
|
||||||
|
1 MARR
|
||||||
|
2 DATE 1870
|
||||||
|
0 TRLR
|
||||||
|
"""
|
||||||
|
|
||||||
|
|
||||||
|
async def _tree(client, email):
|
||||||
|
h = auth(await register(client, email))
|
||||||
|
tid = (await client.post("/api/v1/trees", json={"name": "Imported"}, headers=h)).json()["id"]
|
||||||
|
return h, tid
|
||||||
|
|
||||||
|
|
||||||
|
async def test_gedcom_import(client):
|
||||||
|
h, tid = await _tree(client, "ged1@example.com")
|
||||||
|
resp = await client.post(
|
||||||
|
f"/api/v1/trees/{tid}/gedcom/import",
|
||||||
|
files={"file": ("sample.ged", SAMPLE, "text/plain")},
|
||||||
|
headers=h,
|
||||||
|
)
|
||||||
|
assert resp.status_code == 200, resp.text
|
||||||
|
counts = resp.json()["counts"]
|
||||||
|
assert counts["persons"] == 3
|
||||||
|
assert counts["families"] == 1
|
||||||
|
# partnership (1) + parent_child from both parents to the child (2)
|
||||||
|
assert counts["relationships"] == 3
|
||||||
|
assert counts["events"] == 3 # 2 births + 1 marriage
|
||||||
|
|
||||||
|
people = (await client.get(f"/api/v1/trees/{tid}/persons", headers=h)).json()
|
||||||
|
assert len(people) == 3
|
||||||
|
rels = (await client.get(f"/api/v1/trees/{tid}/relationships", headers=h)).json()
|
||||||
|
assert len(rels) == 3
|
||||||
|
|
||||||
|
|
||||||
|
async def test_gedcom_export_and_reimport(client):
|
||||||
|
h, tid = await _tree(client, "ged2@example.com")
|
||||||
|
await client.post(
|
||||||
|
f"/api/v1/trees/{tid}/gedcom/import",
|
||||||
|
files={"file": ("sample.ged", SAMPLE, "text/plain")},
|
||||||
|
headers=h,
|
||||||
|
)
|
||||||
|
exported = await client.get(f"/api/v1/trees/{tid}/gedcom/export", headers=h)
|
||||||
|
assert exported.status_code == 200
|
||||||
|
text = exported.text
|
||||||
|
assert "INDI" in text and "FAM" in text and "John /Smith/" in text
|
||||||
|
|
||||||
|
# Re-import the export into a fresh tree: people are preserved.
|
||||||
|
tid2 = (await client.post("/api/v1/trees", json={"name": "Round"}, headers=h)).json()["id"]
|
||||||
|
resp = await client.post(
|
||||||
|
f"/api/v1/trees/{tid2}/gedcom/import",
|
||||||
|
files={"file": ("rt.ged", text.encode(), "text/plain")},
|
||||||
|
headers=h,
|
||||||
|
)
|
||||||
|
assert resp.json()["counts"]["persons"] == 3
|
||||||
|
assert resp.json()["counts"]["relationships"] == 3
|
||||||
Reference in New Issue
Block a user