gh_plot_reports corpus (4,299 plots) + concurrency + 4-GPU pool
CORPUS — 4,299 GH plot reports added (3,797 written + 502 from the
earlier slow run + 319 sitemap-listed URLs that 404'd as
discontinued). Combined with prior 760 varieties + 14 AgriPro
trials = 5,073 total chunks now indexed.
scrape/sources/gh_plot_reports.py — concurrency speedup:
- 4 worker threads (ThreadPoolExecutor), each with its own
requests.Session for connection-pool efficiency.
- Shared class-level rate limiter (0.25 sec between ANY two
requests across all threads). Net throughput ~4 req/sec —
well below any rate-limit threshold a public site enforces.
- Diagnosis vs original 1 req/sec: GH had ZERO rate limiting,
zero 429s, zero retries. The 1 sec self-throttle was just too
conservative. Bench:
1 worker / 1.0 sec throttle: ~0.4 plots/sec (190 min ETA)
4 workers / 0.25 sec throttle: ~3 plots/sec (~25 min actual)
rag/chunk.py — chunk size cap for nomic-embed-text's 2048-token
context window:
- Empirically tested: failure threshold is ~5,250 chars on
numeric-heavy trial chunks (chars/token ratio 2.4 vs 3.5 for
prose). Cap at 4,500 chars to be safely under at worst-case
2.2 chars/token.
- Applied to BOTH variety and trial chunks. Marked truncated
chunks with metadata.embed_truncated = True; FULL text stays
in the on-disk .md for get_page to return verbatim.
.gitea/workflows/{refresh,image-only}.yml — OLLAMA_URL pool
restructured for the 4 GPU-pinned endpoints. Bench (50-chunk
batches on nomic-embed-text):
.0.125:11434 (RTX 40-series) 242 embeds/sec ← weight ×4
.0.2:11436 (GPU-pinned) 108 embeds/sec ← weight ×2
.0.2:11435 (GPU-pinned) 72 embeds/sec ← weight ×1
localhost (TITAN X) 37 embeds/sec ← weight ×1
Weighting is done by listing the URL multiple times in
OLLAMA_URL since the embedder uses round-robin. .0.2:11434 is
explicitly EXCLUDED — it isn't pinned to a specific GPU.
Combined index rebuild for 5,073 chunks now finishes in ~3 min
(was 19+ on the single-endpoint pool).
Smoke tests:
✓ list_versions: 5,073 docs across 6 sources, 2 vendors, 6
brands, 4 crops (corn 2711, soy 2016, silage 223, wheat 123).
✓ search_trials({crop=corn, state=IA, year=2024}): 3 IA 2024
corn trials surfaced.
✓ search_trials("Phytophthora resistance soybean trial"): NK
NK43-W1XFS top-1 in LA 2024 trial (cross-vendor result).
✓ search_trials("AP Iliad Idaho wheat"): AgriPro Washington/N
Idaho 2025 trial surfaced.
✓ search_trials(product=DKC65-95): 3 corn trials containing
that hybrid in IL/IA 2024.
✓ search_trials(product=NK1701): 3 corn trials in AR/MS 2024.
✓ Product filter correctly returns EMPTY for products that
aren't in the corpus (DKC65-20 is a 2023 product; 2023 plots
deferred). Anti-hallucination contract preserved.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
This commit is contained in:
@@ -296,7 +296,13 @@ def chunks_from_variety(
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"""
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sidecar = json.loads(Path(sidecar_path).read_text(encoding="utf-8"))
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text = _render_variety_chunk(sidecar)
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# Same 2,048-token cap as trial chunks. Varieties are usually
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# under 3 KB so this rarely fires, but Bayer hybrids with long
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# characteristics_groups can run wide — defensive cap.
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text, truncated = _truncate_for_embed(text)
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meta = _flat_metadata(sidecar)
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if truncated:
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meta["embed_truncated"] = True
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chunk_id = f"{meta['source']}::{meta['source_key']}::0"
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yield {
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"id": chunk_id,
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@@ -525,6 +531,34 @@ def _flat_trial_metadata(sidecar: dict) -> dict:
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return md
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# nomic-embed-text caps at 2,048 tokens (Ollama returns HTTP 400 on
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# inputs that exceed this). chars/token ratio varies wildly:
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# prose: ~3.5 chars/token
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# numeric trial tables: ~2.4 chars/token (GH plot reports with
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# full ranking tables)
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# Empirically: GH plot reports failed at 5,261+ chars; agripro
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# trials at 5,552 chars sometimes failed. Cap at 4,500 chars =
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# ~2.2 chars/token worst-case for 2,048 tokens, leaving safe
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# headroom across all source types. The FULL text stays in the
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# on-disk .md so get_page returns it verbatim regardless.
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MAX_EMBED_CHARS = 4500
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def _truncate_for_embed(text: str) -> tuple[str, bool]:
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"""Cap chunk text to fit nomic-embed-text's 2,048-token context.
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Returns ``(maybe_truncated_text, was_truncated)``. The head is
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preserved because high-signal content (variety identity, top
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performers, ratings preamble) sits at the start of every chunk
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type we produce.
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"""
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if len(text) <= MAX_EMBED_CHARS:
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return text, False
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suffix = "\n…(truncated for embedding; full text via get_page)\n"
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body = text[: MAX_EMBED_CHARS - len(suffix)].rstrip()
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return body + suffix, True
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def chunks_from_trial(
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sidecar_path: Path | str,
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*,
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@@ -548,7 +582,10 @@ def chunks_from_trial(
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md_text = md_p.read_text(encoding="utf-8")
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text = _render_trial_chunk(sidecar, md_text=md_text)
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text, truncated = _truncate_for_embed(text)
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meta = _flat_trial_metadata(sidecar)
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if truncated:
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meta["embed_truncated"] = True
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chunk_id = f"{meta['source']}::{meta['source_key']}::0"
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yield {
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"id": chunk_id,
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